Infinium to SNP
This program helps to convert Infinium 1M-duo chip output text files from Bead Studio
to '*.SNP' files which has the format shoown below:
| Column 1 | Column 2 | Column 3 | Column 4 |
Column 5 | Column 6 | Column 7 |
| SNP name | Chromosome |
Physical Position |
Patient n ID |
Patient n genotype |
Patient n+1 ID |
Patient n+1 genotype |
| RS10938 |
1400101 | 2016609 |
John |
AA |
Fred |
BB |
| RS54678 | 400101 | 2503078 |
John |
AB |
Fred |
NoCall |
Table 1
To use the program, place all your data files in a single folder (as text files)
and press the 'Select' button and then select the data files folder. The program
should then read the files and if completed without error the 'Export' button will
become active. To create the SNP file press the 'Export' button and enter the new
files name. The data file will then be created.
This program can be downloaded from here.
Computer requirements
This program runs on Microsoft Windows, using the .NET 2.0 environment which can be obtained from
here.
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