Findreads

About this program

During the development of Illuminator it became necessary to create a program to check the results it found, to do this FindReads was created. Given a short sequence and clonal sequence data in standard FASTA file format, it will collect and save to file all the reads containing that sequence. If the sequence entered is next to a variant then it is possible to see how often that variant occurs. This task can be simplified by selecting the 'Trim start' option, then opening the file in Excel and sorting the sequences in alphabetical order.

Both programs can be downloaded from here

Computer requirements

This program runs on Microsoft Windows, using the .NET 2.0 environment which can be obtained from here.